MeteoSwiss/pollen_data_workflow
Watch
2
mirror of https://github.com/MeteoSwiss/pollen_data_workflow.git synced 2026-08-26 12:04:50 +00:00
Code Releases Activity
Read-only mirror of https://github.com/MeteoSwiss/pollen_data_workflow — MeteoSwiss. Issues & pull requests at the source.
8 commits 1 branch 0 tags 213 KiB
  • R 100%
Find a file
Exact
Repository files (latest commit first)
Filename Latest commit message Latest commit date
SophieErb f5b50838df
 Update explore_data.R
2025-01-06 00:46:13 +01:00
db_metadata_pollen_base.xlsx Sampling protocols with blank metadata file 2024-12-19 22:40:53 +01:00
explore_data.R Update explore_data.R 2025-01-06 00:46:13 +01:00
LICENSE Initial commit 2024-12-19 21:54:05 +01:00
protocol_form.docx Sampling protocols with blank metadata file 2024-12-19 22:40:53 +01:00
protocol_form.pdf Sampling protocols with blank metadata file 2024-12-19 22:40:53 +01:00
protocol_procedure.docx Sampling protocols with blank metadata file 2024-12-19 22:40:53 +01:00
protocol_procedure.pdf Sampling protocols with blank metadata file 2024-12-19 22:40:53 +01:00
read_zipfile.R R codes to read and explore the data 2025-01-06 00:02:05 +01:00
README.md Update README.md 2025-01-06 00:35:04 +01:00

README.md

This repository contains:

A. 4 protocol files:

  • 2 protocol form files for collecting pollen on the field (.docx and .pdf versions)
  • 2 protocol procedure files explaining the steps of collecting, aerosolising and measuring pollen (.docx and .pdf versions)

B. 2 R code files:

  • read_zipfile: extracts the .json files from the zip files (1 zip file = 1 dataset), then reads the .json files and creates an .Rdata dataframe with all the .json information for all datasets
  • explore_data: based on the json dataframe created with read_zipfile.R, summarises the data information, filters the data and creates PCA plots

C. a .xlsx file

  • db_metadata_pollen_base.xlsx is a blank version of the metadatabase file that describes the pollen samples and datasets